Gillian Reynolds

Gillian Reynolds

Senior Bioinformatician at the Earlham Institute

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Pages

Posts

Future Blog Post

less than 1 minute read

Published:

This post will show up by default. To disable scheduling of future posts, edit config.yml and set future: false.

Blog Post number 4

less than 1 minute read

Published:

This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.

Blog Post number 3

less than 1 minute read

Published:

This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.

Blog Post number 2

less than 1 minute read

Published:

This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.

Blog Post number 1

less than 1 minute read

Published:

This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.

publications

Structure of SPH (self-incompatibility protein homologue) proteins: a widespread family of small, highly stable, secreted proteins

Published in Biochemical Journal, 2019

Recommended citation: Rajasekar, K.V., Ji, S., Coulthard, R.J., Ride, J.P., Reynolds, G.L., Winn, P.J., Wheeler, M.J., Hyde, E.I. and Smith, L.J. (2019). "Structure of SPH (self-incompatibility protein homologue) proteins: a widespread family of small, highly stable, secreted proteins ." Biochemical Journal. 476(5), pp.809-826. http://Glfrey.github.io/files/sph.pdf

PPPred: Classifying Protein-phenotype Co-mentions Extracted from Biomedical Literature

Published in Proceedings of the 10th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, 2019

Recommended citation: Pourreza Shahri, M., Reynolds, G., Roe, M.M. and Kahanda, I. (2019). "PPPred: Classifying protein-phenotype co-mentions extracted from biomedical literature ." Proceedings of the 10th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics . (pp. 414-422). http://Glfrey.github.io/files/pppred.pdf

Transcriptional responses to 2,4-D herbicide treatment of a Eurasian (Myriophyllum spicatum) and a hybrid (M. spicatum × M. sibiricum) genotype of watermilfoil that differ in their sensitivity to 2,4-D

Published in Aquatic Botany, 2023

Recommended citation: Chorak, G.M., Correr, F.H., Lachowiec, J., Reynolds, G. and Thum, R.A., 2023. Transcriptional responses to 2, 4-D herbicide treatment of a Eurasian (Myriophyllum spicatum) and a hybrid (M. spicatum× M. sibiricum) genotype of watermilfoil that differ in their sensitivity to 2, 4-D. Aquatic Botany, 186, p.103631. http://Glfrey.github.io/files/TranscriptionalResponses.pdf

teaching

Guest Lecturer in Genomics and Bioinformatics

Undergraduate course, The University Worcester, School of Science and the Environment, 2014

A recurring guest lecturer position from 2014-2016 in the third year undergraduate module “Genomics and Bioinformatics” at the University of Worcester where I wrote and delivered lectures and practical workshops on phylogenetics.

Guest lecturer in Introduction to Biological Chemistry

Undergraduate course, The University Worcester, School of Science and the Environment, 2014

Guest Lecturer in the first year undergraduate module “Introduction to Biological Chemistry” at the University of Worcester where I wrote and delivered a lecture and practical workshop on the application of basic protein phylogenetics.

Module Leader in Human Genetics

Undergraduate course, The University Worcester, School of Science and the Environment, 2017

For spring 2017 I served as the module leader for the second year human genetics course at the University of Worcester. In this module, I covered topics such as the human genome project and its updates, the health-related impacts of various large and small-scale genomic mutations, the medical interpretation of pedigrees,the ethics of genomic testing, genomic ancestry and genetic epideniology.

Co-module Leader in Bioinformatics and Genomics

Undergraduate course, The University Worcester, School of Science and the Environment, 2017

For the Autumn 2017 semester, Dr. Mike Wheeler and I redesigned the content of the final year undergraduate module “Genomics and Bioinformatics” to feature updated lectures and practical workshops. Through these sessions we were able to provide students both a sound theoretical background and real hands-on experience on the application of bioinformatics in a wide variety of biological feilds. Specific areas I was responsible for included lectures and workshops on phylogenetics, next generation sequence, genome assembly and annotation and transcriptomics.

Guest Lecturer in Cell Biology

Undergraduate course, The University Worcester, School of Science and the Environment, 2020

Guest Lecturer in the first year undergraduate module “Cell Biology” at the University of Worcester where the subject was “An introduction to bioinformatics” which featured both a lecture and a practical workshop.

NBI Undergraduate Summer School

Undergraduate course, Norwich Bioscience Institute, 2024

Undergraduate teaching session for NBI international summer school. The subject was “Phylogenetics and conservation” which featured lectures (co-delivered by Dr. Camilla Ryan) and a practical workshop.